Knowledge Base

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  • IRMS
  • 13C
  • Glucose metabolism

Insulin-dependent glucose metabolism in dairy cows with variable fat mobilization around calving

Weber C. (1), Schäff C.T. (1), Kautzsch U. (1), Börner S. (1), Erdmann S. (1), Görs S. (1), Röntgen M. (2), Sauerwein H. (3), Bruckmaier R.M. (4), Metges C.C. (1), Kuhla B. (1) and Hammon H.M. (1)

1) Institute of Nutritional Physiology ("Oskar Kellner"), Leibniz Institute for Farm Animal Biology (FBN), 18196 Dummerstorf, Germany, 2) Institute of Muscle Biology and Growth, Leibniz Institute for Farm Animal Biology (FBN), 18196 Dummerstorf, Germany, 3) Institute of Animal Science, Physiology and Hygiene Unit, University of Bonn, 53113 Bonn, Germany, 4) Veterinary Physiology, Vetsuisse Faculty, University of Bern, 3001 Bern, Switzerland

Journal of Dairy Science (2016), In press, doi: 10.3168/jds.2016-11022

Goal: Dairy cows undergo significant metabolic and endocrine changes during the transition from pregnancy to lactation, and impaired insulin action influences nutrient partitioning toward the fetus and the mammary gland. Because impaired insulin action during transition is thought to be related to elevated body condition and body fat mobilization, we hypothesized that over-conditioned cows with excessive body fat mobilization around calving may have impaired insulin metabolism compared with cows with low fat mobilization.

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  • IRMS
  • Methane
  • Groundwater
  • Carbon Isotopes

Chemical and isotope compositions of shallow groundwater in areas impacted by hydraulic fracturing and surface mining in the Central Appalachian Basin, Eastern United States

St. Thomas M. LeDoux (1), Anna Szynkiewicz (1), Anthony M. Faiia (1), Melanie A. Mayes (2), Michael L. McKinney (1) and William G. Dean (1)

1) The University of Tennessee, Dept. of Earth and Planetary Sciences, 1412 Circle Drive, Knoxville, TN, 37996, USA, 2) The Climate Change Institute and the Environmental Science Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, TN, 37831, USA

Applied Geochemistry (2016), In press, doi: 10.1016/j.apgeochem.2016.05.007

Goal: This study compares concentrations and isotopic compositions of CH4 sampled from domestic groundwater wells in Letcher County, Eastern Kentucky in order to characterize its occurrence and origins in relation to both neighboring hydraulically fractured natural gas wells and surface coal mines. The studied groundwater showed concentrations of CH4 ranging from 0.05 mg/L to 10 mg/L, thus, no immediate remediation is required. The δ13C values of CH4 ranged from −66‰ to −16‰, and δ2H values ranged from −286‰ to −86‰, suggesting an immature thermogenic and mixed biogenic/thermogenic origin. The occurrence of CH4 was not correlated with proximity to hydraulically fractured natural gas wells. Generally, CH4 occurrence corresponded with groundwater abundant in Na+, Cl−, and HCO3−, and with low concentrations of SO42−.

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  • IRMS
  • Gas Bench
  • Sparkling Wine

Use of Isotope Ratio Determination (13C/12C) to Assess the Production Method of Sparkling Wine

Rossier J.S., Maury V., Gaillard L. and Pfammatter E.

Service de la consommation et des affaires vétérinaires (SCAV) Rue Pré d'Amédée 2 CH-1950 Sion, Switzerland

Chimia (Aarau) (2016), V70 (5), pp338-344, doi: 10.2533/chimia.2016.338

Goal: The production of a sparkling wine can be performed with different methods taking from a few weeks to several years, which often justifies a difference in added value for the consumer. This paper presents the use of isotope ratio δ(13)C measurements combined with physico-chemical analyses for the determination of mislabelling of sparkling wines produced by 'ancestral', 'traditional', 'closed tank' or 'gasification' methods. This work shows that the isotope composition of CO2 compared with that of the corresponding dried residue of wine (DRW) can assess whether carbonate CO2 in a sparkling wine originates from alcohol fermentation or from artificial gas addition. Isotopic ratios expressed as δ(13)CCO2 and δ(13)CDRW measurements have been obtained for each wine by Gas Bench isotopic ratio mass spectroscopy and cavity ring down infrared spectroscopy, respectively. When the difference between δ(13)CCO2 and δ(13)CDRW is negative, the presence of artificial CO2 can be undoubtedly inferred, which would exclude the production methods 'ancestral' or 'traditional' for instance. Other parameters such as alcohol content, sugar and acid distributions are also important to complete the analytical panel to aid fraud tracking.

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  • IRMS
  • Nitrification
  • Nitrogen Cycle

Rapid nitrification of wastewater ammonium near coastal ocean outfalls, Southern California, USA

Karen McLaughlin (1), Nikolay P. Nezlin (1), Meredith D.A. Howard (1), Carly D.A. Beck (1), Raphael M. Kudela (2), Michael J. Mengel (3) and George L. Robertson (3)

1) Southern California Coastal Water Research Project, Costa Mesa, CA, USA, 2) University of California, Santa Cruz, CA, USA, 3) Orange County Sanitation District, Fountain Valley, CA, USA

Estuarine, Coastal and Shelf Science (2016), in press

Goal: In the southern California Bight (SCB), there has been a longstanding hypothesis that anthropogenic nutrient loading is insignificant compared to the nutrient loading from upwelling. However, recent studies have demonstrated that, in the nearshore environment, nitrogen (N) flux from wastewater effluent is equivalent to the N flux from upwelling. The isotopic composition of suspended particulate organic matter (POM) recorded low δ15NPN and δ13CPN values around the outfall under normal operations suggesting the incorporation of “nitrified” NO3− and wastewater dissolved organic carbon into POM. Our results demonstrate the critical role of nitrification in nitrogen cycling in the nearshore environment of urban oceans

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  • IRMS
  • Gas Bench
  • Metabolic water
  • Oxygen isotopes

Probing the metabolic water contribution to intracellular water using oxygen isotope ratios of PO4

Hui Lia (1), Chan Yu (2), Fei Wang (2), Sae Jung Chang (1), Jun Yao (2) and Ruth E. Blake (1,2)

1) Department of Geology and Geophysics, Yale University, New Haven, CT 06520-8109, USA, 2) School of Civil & Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, People’s Republic of China

Proceedings of the National Academy of Science in USA (2016), V113 (21), pp5862-5867, doi: 10.1073/pnas.1521038113

Goal: Results presented here, based on techniques of multilabeled water isotope probing and measurement of 18O/16O ratios in PO4 moieties of intracellular biomolecules, which allows direct sampling of intracellular environments, demonstrate a significant metabolic water component in intracellular water that is consistent across multiple strains of bacteria when grown under similar conditions. The intracellular water probe presented here, based on PO4 δ18O in DNA/biomass, may be extended to other biomolecules and organisms.

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  • IRMS
  • Gas Bench
  • Nitrogen

Co-occurrence of methanogenesis and N2 fixation in oil sands tailings

C.E. Collins (1), J.M. Foght (2) and T. Siddique (3)

1) Department of Renewable Resources, University of Alberta, Edmonton, AB T6G 2G7, Canada, 2) Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada, 3) Department of Renewable Resources, University of Alberta, Edmonton, AB T6G 2G7, Canada

Science of The Total Environment (2016), V565, pp306-312, doi: 10.1016/j.scitotenv.2016.04.154

Goal: Oil sands tailings ponds in northern Alberta, Canada have been producing biogenic gases via microbial metabolism of hydrocarbons for decades. Persistent methanogenic activity in tailings ponds without any known replenishment of nutrients such as fixed nitrogen (N) persuaded us to investigate whether N2 fixation or polyacrylamide (PAM; used as a tailings flocculant) could serve as N sources. Cultures comprising mature fine tailings (MFT) plus methanogenic medium supplemented with or deficient in fixed N were incubated under an N2 headspace.

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  • IRMS: Nitrogen
  • Greenhouse

Neglecting diurnal variations leads to uncertainties in terrestrial nitrous oxide emissions

Narasinha J. Shurpali (1), Üllar Rannik (2), Simo Jokinen (1), Saara Lind (1), Christina Biasi (1), Ivan Mammarella (2), Olli Peltola (2), Mari Pihlatie (2,3), Niina Hyvönen (1), Mari Räty (4), Sami Haapanala (2), Mark Zahniser (5), Perttu Virkajärvi (4), Timo Vesala (2,6,7) and Pertti J. Martikainen (1)

1) Biogeochemistry research group, Department of Environmental and Biological Sciences, University of Eastern Finland, Yliopistoranta 1D E, PO Box 1627, Kuopio campus, FI-70211 Finland, 2) Department of Physics, P.O. Box 48, University of Helsinki, 00014 Finland, 3) Department of Food and Environmental Sciences, Division of Microbiology and Biotechnology, P.O. Box 56, University of Helsinki, FI-00014 Finland, 4) Natural Resources Institute Finland, Green technology, Halolantie 31A Maaninka FI-71750, Finland, 5) Aerodyne Research, Inc., 45 Manning Road Billerica, MA 01821-3976, USA, 6) Viikki Plant Science Centre, University of Helsinki, P.O. Box 27, FI-00014 Finland, 7) Department of Forest Sciences, P. O. Box 27, University of Helsinki, 00014 Finland

Nature Scientific Reports (2016), V6, 25739, doi: 10.1038/srep25739

Goal: Nitrous oxide (N2O) is an important greenhouse gas produced in soil and aquatic ecosystems. Its warming potential is 296 times higher than that of CO2. Most N2O emission measurements made so far are limited in temporal and spatial resolution causing uncertainties in the global N2O budget. Recent advances in laser spectroscopic techniques provide an excellent tool for area-integrated, direct and continuous field measurements of N2O fluxes using the eddy covariance method. By employing this technique on an agricultural site with four laser-based analysers, we show here that N2O exchange exhibits contrasting diurnal behaviour depending upon soil nitrogen availability. When soil N was high due to fertilizer application, N2O emissions were higher during daytime than during the night. However, when soil N became limited, emissions were higher during the night than during the day. These reverse diurnal patterns supported by isotopic analyses may indicate a dominant role of plants on microbial processes associated with N2O exchange. This study highlights the potential of new technologies in improving estimates of global N2O sources.

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  • IRMS
  • Triple Oxygen Isotopes
  • Diatoms

A calibration of the triple oxygen isotope fractionation in the SiO2–H2O system and applications to natural samples

Z.D. Sharp (1,2), J.A. Gibbons (1), O. Maltsev (1), V. Atudorei (1,2), A. Pack (3), S. Sengupt (1,3), E.L. Shock (4,5) and L.P. Knauth (4)

1) Department of Earth and Planetary Sciences, University of New Mexico, 200 Yale Blvd, Albuquerque, NM 87131, USA, 2) Center for Stable Isotopes, University of New Mexico, 200 Yale Blvd, Albuquerque, NM 87131, USA, 3) Geowissenschaftliches Zentrum, Georg-August-Universität, Goldschmidtstraße 1, D-37073 Göttingen, Germany, 4) School of Earth and Space Exploration, Arizona State University, PO Box 871404, Tempe, AZ 85287-1404, USA, 5) School of Molecular Sciences, Arizona State University, PO Box 871404, Tempe, AZ 85287-1404, USA

Geochimica et Cosmochimica Acta (2016), V186, pp105–119, doi:10.1016/j.gca.2016.04.047

Goal: It is now recognized that variations in the Δ17O of terrestrial materials resulting from purely mass dependent fractionations, though small, have geological significance. In this study, the δ18O and δ17O values of selected low temperature quartz and silica samples were measured in order to derive the quartz-water fractionation–temperature relationship for the three oxygen isotope system. A 18O/16O quartz-water fractionation equation valid for all temperatures was generated from published high temperature exchange experiments and ...

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  • IRMS
  • Nitrogen isotopes
  • Denitrification

Multiyear dual nitrate isotope signatures suggest that N-saturated subtropical forested catchments can act as robust N sinks

Longfei Yu (1), Jing Zhu (1,2), Jan Mulder (1) and Peter Dörsch (1)

1) Department of Environmental Sciences, Norwegian University of Life Sciences, Aas, Norway, 2) Department of Environment and Resources, Guangxi Normal University, Guilin, China

Global Change Biology (2016), doi: 10.1111/gcb.13333

Goal: In forests of the humid subtropics of China, chronically elevated nitrogen (N) deposition, predominantly as ammonium (NH4+), causes significant nitrate (NO3−) leaching from well-drained acid forest soils on hill slopes (HS), whereas significant retention of NO3− occurs in near-stream environments (groundwater discharge zones, GDZ). To aid our understanding of N transformations on the catchment level, we studied spatial and temporal variabilities of concentration and natural abundance (δ15N and δ18O) of nitrate (NO3−) in soil pore water along a hydrological continuum in the N-saturated Tieshanping (TSP) catchment, southwest China. Our data show that effective removal of atmogenic NH4+ and production of NO3− in soils on HS were associated with a significant decrease in δ15N-NO3−, suggesting efficient nitrification despite low soil pH.

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  • IRMS
  • CO2
  • DOC
  • Oxygen Isotopes

An “On-Line” Method for Oxygen Isotope Exchange Between Gas-Phase CO2 and Water

N.P. Levitt (1,2) and C.S. Romanek (3)

1) NASA Astrobiology Institute and Department of Earth and Environmental Sciences, University of Kentucky, USA, 2) NASA Astrobiology Institute and Department of Geoscience, University of Wisconsin-Madison, USA, 3) NASA Astrobiology Institute and Department of Earth and Environmental Sciences, Furman University, USA

Aquatic Geochemistry (2016), V22 (3), pp 253-269, doi: 10.​1007/​s10498-016-9291-5

Goal: An “on-line” mixing system has been developed and evaluated for continuous oxygen isotope exchange between gas-phase CO2 and liquid water. The system is composed of three basic parts: equipment and materials used to introduce water and gas into a mixing reservoir, the mixing and exchange reservoir, and a vessel used to separate gas and water phases exiting the system. A series of experiments were performed to monitor the isotope exchange process over a range of temperatures (5–40 °C) and CO2 partial pressures (202–15,200 Pa).

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  • IRMS
  • NO emission

Aridity and plant uptake interact to make dryland soils hotspots for nitric oxide (NO) emissions

P.M. Homyak (1), J.C. Blankinship (1), K. Marchus (1), D.M. Lucero (2), J.O. Sickman (2) and J.P. Schimel (1)

1) Earth Research Institute and Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, 2) Department of Environmental Sciences, University of California, Riverside, CA 92521

Proceedings of the National Academy of Science in USA (2016), V113 (19), pp2608-2616, doi:10.1073/pnas.1520496113

Goal: Nitric oxide (NO) controls the atmosphere’s oxidative capacity. In soils, NO emissions are thought to be controlled by a tradeoff that develops in response to changes in soil moisture: dry soils limit substrate diffusion, whereas wet soils limit gas diffusivity, such that moist soils favor NO emissions. In drylands, however, NO emissions can be highest when soils are dry and immediately following rewetting. Aridity and vegetation interact to generate unexpected NO emission patterns. The shutdown in plant N uptake during the dry season causes NO emissions to increase, whereas arid conditions concentrate resources in dry soils, stimulating NO pulses upon rewetting. Chemistry governs the rapid initial NO pulse, whereas biological processes control later emissions as microbes recover from drought stress.

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  • IRMS
  • C isotopes
  • DOC
  • Methane cycling

Origin and temporal variability of unusually low δ13C-DOC values in two High Arctic catchments

R.S. Hindshaw (1), S.Q. Lang (2,3), S.M. Bernasconi (3), T.H.E. Heaton (4), M.R. Lindsay (5) and E.S. Boyd (5)

1) Department of Earth and Environmental Sciences, University of St. Andrews, St. Andrews, UK; 2) Department of Earth Sciences, ETH Zürich, Zurich, Switzerland, 3) Department of Earth and Ocean Sciences, University of South Carolina, Columbia, South Carolina, USA, 4) NERC Isotope Geosciences Laboratory, Nottingham, UK, 5) Department of Microbiology and Immunology, Montana State University, Bozeman, Montana, USA

Journal of Geophyiscal Research (2016), V121, pp1073–1085, doi:10.1002/2015JG003303.

Goal: The stable carbon isotopic composition of dissolved organic matter (δ13C-DOC) reveals information about its source and extent of biological processing. Here we report the lowest δ13C-DOC values (−43.8‰) measured to date in surface waters. The streams were located in the High Arctic, a region currently experiencing rapid changes in climate and carbon cycling. Based on the widespread occurrence of methane cycling in permafrost regions and the detection of the pmoA gene, a proxy for aerobic methanotrophs, we conclude that the low δ13C-DOC values are due to organic matter partially derived from methanotrophs consuming biologically produced, 13C-depleted methane. These findings demonstrate the significant impact that biological activity has on the stream water chemistry exported from permafrost and glaciated environments. ..., occurrences of low δ13C-DOC values may be more widespread than previously recognized, with implications for understanding C cycling in these environments.

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  • IRMS
  • Cl and Br Isotopes

Experimental determination of stable chlorine and bromine isotope fractionation during precipitation of salt from a saturated solution

H.G.M. Eggenkamp (1,2,3), M. Bonifacie (3,4), M. Ader (3) and P Agrinier (3)

1) Onderzoek & Beleving, Bussum, The Netherlands; 2) Centro de Petrologia e Geoquímica, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal, 3) Institut de Physique du Globe de Paris, Equipe Géochimie Isotopes Stables, Sorbonne Paris Cité, UMR 7154 CNRS, F-75238 Paris, France, 4) Institut de Physique du Globe de Paris, Observatoire Volcanologique et Sismologique de Guadeloupe, UMS 3454 CNRS, Le Houëlmont, 97113 Gourbeyre Guadeloupe, France

Chemical Geology (2016), V433, pp46–56, doi:10.1016/j.chemgeo.2016.04.009

Goal: In order to better understand the chlorine and bromine stable isotope fractionation that occurs when chloride and bromide salts precipitate from their saturated solutions, we determined experimentally the equilibrium fractionation factors between precipitating pure salt minerals and their coexisting saturated brine at 22 °C. Fractionation factors (expressed as 103lnα(37Cl/35Cl)salt-brine and 103lnα81Br/79Brsalt-brine) obtained for 11 chloride and 7 bromide salts of geological and industrial interest show a relatively largerange of variation (from − 0.31 to + 0.41), with the salt that precipitates having either a lower or a higher isotope ratio than the brine from which they precipitate. A negative fractionation factor indicates that the brine has a larger isotope ratio than the precipitate, a positive factor that the precipitate has a larger isotope ratio.In these measurements the uncertainty is defined as the 1σ standard deviation of replicate determinations.

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  • IRMS
  • C and O isotopes
  • Tooth enamel

Stable isotopes show resource partitioning among the early Late Miocene herbivore community at Rudabánya II: Paleoenvironmental implications for the hominoid, Rudapithecus hungaricus

L.C. Eastham (1), R.S. Feranec (2) and D.R. Begun (1)

1) Anthropology Department, University of Toronto, 19 Russell Street, Toronto, ON, M5S 2S2, Canada, 2) Research and Collections, New York State Museum, 3140 Cultural Education Center, Albany, NY 12230, United States

Palaeogeography, Palaeoclimatology, Palaeoecology (2016), V454, pp161–174, doi:10.1016/j.palaeo.2016.04.036

Goal: Examining how species use and partition resources within an environment can lead to a better understanding of community assembly and diversity. The rich early Late Miocene (early Vallesian) deposits at Rudabánya II (R. II) in northern central Hungary preserve an abundance of forest dwelling taxa, including the hominoid Rudapithecus hungaricus. Here we use the carbon and oxygen stable isotope compositions of tooth enamel carbonate from 10 genera of medium to large-bodied mammals to evaluate resource use and partitioning among the herbivore community, and to reconstruct the paleoenvironment of Rudapithecus. The range of stable carbon and oxygen isotope values (δ13C and δ18O) displayed by the R. II fauna indicates a variable forest environment, which included both open and closed canopy habitats. The relatively low δ13C and δ18O values found in all sampled taxa are consistent with high levels of precipitation and humidity.

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  • IRMS
  • Gas Bench II
  • Carbon Isotopes
  • Natural waters

Precise δ13C analysis of dissolved inorganic carbon in natural waters using automated headspace sampling and continuous-flow mass spectrometry.

M. E. Torres, A. C. Mix, and W. D. Rugh

College of Oceanic and Atmospheric Sciences, Oregon State University Corvallis, OR 97331-5503, USA

Limnology and Oceanography; Methods (2005), V3 (8), pp349–360, doi: 10.4319/lom.2005.3.349

Goal: A new method is presented for automated measurement of the δ13C of the dissolved inorganic carbon in natural waters, using a Gas Bench-II online with a DELTA XL IRMS. This technique requires a volume (30-500 mL), analyses are rapid (~80 samples/d), and little / no manual preparation is necessary. The flexibility offered by using sample loops of various sizes permits analyses of aliquots containing 2 to 50 μg C. Based on multiple replicate measurements over a 7-week period, the precision of this technique is estimated to be better than ± 0.15‰ (1 sample std. dev.), which is similar to the precision of methods in use. This precision can be improved upon (averaging ± 0.04‰, but generally better than ± 0.07‰) and analyses are monitored against a stock solution of reagent NaHCO3, which remains isotopically stable in powder form. NaHCO3 can be analyzed with traditional acid-digestion methods using dual-inlet mass spectrometry, as well as in dissolved form on the Gas Bench-II.